People
- English
- Türkçe
Gülay Özcengiz
Professor
+90 (312) 210 5170
ozcengiz[at]metu.edu.tr
Room 225
EDUCATION
- 1995-1996: Postdoc, MIT, Cambridge, MA, USA, Department of Biology
- 1989-1990: Postdoc, Manchester University, UK, Department of Biology
- 1984-1989: PhD, MIT, Cambridge, MA, USA, Department of Biology - Middle East Technical University, Department of Biological Sciences
- 1981-1983: MSc., Middle East Technical University, Department of Biological Sciences
- 1975-1980: BSc., Hacettepe University, Department of Biology
AREA OF RESEARCH
Molecular Microbiology and Genetics
- Omic technologies and functional studies for Bacillus subtilis to analyse the role of the dipeptide antibiotic bacilysin as a small global regulator in cellular physiology
- Transcriptional regulation of cephamycin C biosynthetic gene cluster and pathway engineering to improve clavulanic acid and cephamycin C biosynthesis in Streptomyces clavuligerus
- Proteomics and immunoproteomics of Bordetella pertussis and development of novel subunit vaccines
- Development of OMV-based, re-designed and engineered vaccine platforms for pathogenic microbes.
SELECTED PUBLICATIONS
- Ünsaldı, E., Kurt-Kızıldoğan, A., Özcan, S., Becher, D., Voigt, B., Aktaş, C., and Özcengiz, G. (2021). Proteomic analysis of a hom-disrupted, cephamycin C overproducing Streptomyces clavuligerus. Protein and Peptide Letters, 28(2), 205–220.
- Ertekin, O., Kutnu, M., Taşkın, A.A., Demir, M., Yazgan Karataş, A. and Özcengiz, G. (2020). Analysis of a bac operon-silenced strain suggests pleiotropic effects of bacilysin in Bacillus subtilis. Journal of Microbiology. 58 (4): 297-313.
- Yılmaz, Ç. and Özcengiz G. (2017). Antibiotics: Pharmacokinetics, toxicity, resistance and multidrug efflux pumps. Biochemical Pharmacology. 133: 43-62.
- Ünsaldı, E., Kurt-Kızıldoğan, A., Voigt, B., Becher, D. and Özcengiz, G. (2017). Proteome-wide alterations in an industrial clavulanic acid producing strain of Streptomyces clavuligerus. Synthetic and Systems Biotechnology. 2: 39-48.
- Yılmaz, Ç., Apak, A., Özcengiz, E. and Özcengiz G. (2016). Immunogenicity and protective efficacy of recombinant iron superoxide dismutase protein from Bordetella pertussis in mice models. Microbiology and Immunology. 60: 717-724.
- Özcengiz, G. and Öğülür, İ. (2015). Biochemistry, genetics and regulation of bacilysin biosynthesis and its significance more than an antibiotic.New Biotechnology. 32: 612-619.
+90 (312) 210 5190
caner.aktas[at]metu.edu.tr
EDUCATION
- 2018 - : PhD., Middle East Technical University, Department of Biological Sciences, Molecular Biology and Genetics
- 2016 - 2018: MSc., Middle East Technical University, Department of Biological Sciences, Molecular Biology and Genetics
- 2010 - 2016: BSc., Middle East Technical University, Department of Biological Sciences, Biology
RESEARCH INTERESTS
- Molecular microbiology and genetics
- Functional genomics
- Dynamic gene expression analysis
- Bacterial transformation
- Proteomics
PUBLICATIONS
- Ünsaldı, E., Kurt-Kızıldoğan, A, Özcan, S., Becher, D., Voigt, B., Aktaş, C. and Özcengiz, G. (2021). Proteomic analysis of a hom-disrupted, cephamycin C overproducing Streptomyces clavuligerus.Protein & Peptide Letters. 28 (2): 205-220.
POSTER PRESENTATIONS
- Aktaş, C. (2018). Bacillus subtilis overproduces industrially important extracellular enzymes upon the targeted deletion of bacilysin biosynthetic operon. New Biotechnology Vol. 44, Suppl. S. p. S89, P9-2.
- Aktaş, C. (2018). Systemic analysis of multiple coordinated changes associated with clavulanic acid overproduction in an industrial strain of S. clavuligerus. New Biotechnology Vol. 44, Suppl. S. p. S109, P16-2.
- Aktaş, C. (2018). Proteome-wide analysis of pleiotropic effects of targeted homoserine dehydrogenase (hom) gene disruption in Streptomyces clavuligerus. New Biotechnology Vol. 44, Suppl. S. p. S109, P16-3.
+90 (312) 210 5190
meltem.kutnu[at]metu.edu.tr
EDUCATION
- 2019 - : PhD., Middle East Technical University, Department of Biological Sciences, Molecular Biology and Genetics
- 2016 - 2019: MSc., Middle East Technical University, Department of Biological Sciences, Molecular Biology and Genetics
- 2012 - 2016: BSc., Bahcesehir University, Department of Genetics and Bioinformatics
RESEARCH INTERESTS
- Bacterial bioinformatics
- Microbial genomics and transcriptomics
- Functional genomics
- Antimicrobial resistance
PUBLICATIONS
- Kutnu, M., Tekin-İşlerel, E., Tunçbağ, N. and Özcengiz, G. (2022). Comparative Biological Network Analysis for Differentially Expressed Proteins as a Function of Bacilysin Biosynthesis in Bacillus subtilis. Integrative Biology, 14(5): 99-110.
- Ertekin, O., Kutnu, M., Taşkın, A.A., Demir, M., Yazgan Karataş, A. and Özcengiz, G. (2020). Analysis of a bac operon-silenced strain suggests pleiotropic effects of bacilysin in Bacillus subtilis. Journal of Microbiology. 58 (4): 297-313.
POSTER PRESENTATIONS
- Kutnu, M. (2019, July 23-26). Biological Network Modelling Based on Differentially Expressed Proteins in a Bacilysin-Deficient Strain of Bacillus subtilis. 20th International Congress on Bacilli and Gram-Positive Bacteria, Washington, DC, USA.
- Kutnu, M. (2018, Oct 10-13).Whole Genome Sequencing Analysis of Lab-adapted Bacillus subtilis Strains Implies Strain Evolution in 40 Years. 14th Congress of Microbiologists in Bulgaria, Hisarya, Plovdiv, Bulgaria.
AWARDS
- Kutnu, M. (2018, Oct 10-13).Whole Genome Sequencing Analysis of Lab-adapted Bacillus subtilis Strains Implies Strain Evolution in 40 Years. 14th Congress of Microbiologists in Bulgaria, Hisarya, Plovdiv, Bulgaria - Best Poster Award
+90 (312) 210 5190
gozde.celik_01[at]metu.edu.tr
EDUCATION
- 2021 - : PhD., Middle East Technical University, Department of Biotechnology
- 2018 - 2021: MSc., Middle East Technical University, Department of Biotechnology
- 2013 - 2018: BSc., Middle East Technical University, Department of Biological Sciences, Biology
RESEARCH INTERESTS
- Microbiology
- Molecular microbiology
- Immunology
PUBLICATIONS
- Kurt-Kızıldoğan, A., Çelik, G., Ünsaldı, E., Özcan, S., Ayaz-Güner, Ş. and Özcengiz, G. (2022). An integrative-omics analysis of an industrial clavulanic acid-producing Streptomyces clavuligerus. Applied Microbiology and Technology, 106(18): 6139-6156.
+90 (312) 210 5190
duygu.keser[at]metu.edu.tr
EDUCATION
- 2019 - Present: MSc., Middle East Technical University, Department of Biological Sciences, Biology
- 2012 - 2019: BSc., Middle East Technical University, Department of Biological Sciences, Molecular Biology and Genetics
- 2008 - 2012: Bartın Anatolian Teacher High School
RESEARCH INTERESTS
- Molecular microbiology and genetics
- Immunology
- Biotechnology
+90 (312) 210 5190
selin.kocak[at]metu.edu.tr
EDUCATION
- 2021 - : MSc., Middle East Technical University, Department of Biological Sciences, Biology
- 2016 - 2021: BSc., Middle East Technical University, Department of Biological Sciences, Biology
- 2012 - 2016: Süleyman Demirel Anatolian High School
RESEARCH INTERESTS
- Microbiology
- Bacterial genetics
- Molecular biology
+90 (312) 210 5190
berk.dogan[at]metu.edu.tr
EDUCATION
- 2021 - : MSc., Middle East Technical University, Department of Biological Sciences, Molecular Biology and Genetics
- 2017 - 2021: BSc., Middle East Technical University, Department of Biological Sciences, Molecular Biology and Genetics
- 2013 - 2017: ODTÜ GVO Private High School
RESEARCH INTERESTS
- Microbiology
- Molecular microbiology and genetics
- Biotechnology
- Immunology
- Virology
- Sergen Akaysoy
- Naz Kocabay
- Zeynep Eran
- Ozan Ertekin
- Nazlı Hilal Türkmen
- Cemre Özbalcı
- İlayda Baydemir
- Samet Aytekin
- Elif Tekin İşlerel
- Çiğdem Yılmaz Çolak
- Eser Ünsaldı
- Ayça Çırçır
- İsmail Cem Yılmaz
- Orhan Özcan
- Pervane Afkhami
- Emrah Altındiş
- Aycan Apak
- Aslı Aras Taşkın
- Mikhail Bibov
- Mustafa Çiçek
- Didem Coral
- Mustafa Demir
- Ayşe Koca Çaydaşı
- Neslihan Ergen
- Erkam Gündoğdu
- Levent Kaya
- Aslıhan Kurt
- Alper Mutlu
- Bülent İçgen
- Elvin İşcan
- Sezer Okay
- İsmail Öğülür
- Servet Özcan
- Hayriye Özçelik
- Melek Özkan
- Hande Selamoğlu
- İbrahim Sertdemir
- Bilgin Taşkın
- Burcu Tefon
- Zeynep Tokcaer
- Sedef Tunca
- Işıl Tüzün
- Güliz Vanlı
- Çiğdem Yağcıoğlu
- Volkan Yıldırım
- Ebru İnce Yılmaz
- Araz Zeyniyev
- Servet Özcan
- Ayten Yazgan Karataş
Last Updated:
15/11/2022 - 13:17